Export Your Work
Export analysis as PDF reports, Jupyter notebooks, or slide decks.
Overview
Omics-OS Cloud can export your analysis session into three formats: a branded scientific report (PDF), an executable Jupyter notebook, or a presentation slide deck. Each format captures the conversation, methodology, results, and figures from your session, packaged for a different audience -- reviewers, computational collaborators, or conference presentations.
Exports are generated server-side using the session's chat history and results. A progress indicator tracks generation in real time.
Export Types
Scientific Report
A PDF document with Omics-OS branding containing methodology, results, figures, and interpretations extracted from the session. Also produces a Markdown source file for further editing. Suitable for sharing with supervisors, collaborators, or as a supplement to publications.
Pipeline Notebook
A Jupyter notebook (.ipynb) containing executable Python code that reproduces the analysis steps from the session. Ideal for handing off reproducible workflows to computational team members or archiving the analysis pipeline.
Slide Deck
A presentation summarizing key findings and figures from the session. Available as PDF (all tiers) or editable PowerPoint (.pptx, Cloud tier and above). Designed for lab meetings, conference presentations, or quick stakeholder updates.
How to Export
Open the Export dialog
Click the Export button in the chat header of your session.
Choose a format
Select Scientific Report, Pipeline Notebook, or Slide Deck. If you choose Slide Deck, a second step asks for the output format (PDF or PowerPoint).
Wait for generation
A progress indicator appears while the export is generated server-side. This typically takes 10-30 seconds depending on session length.
Download your files
When generation completes, click any file to download it. Reports produce a PDF and Markdown file. Slide decks produce a PDF (and optionally a .pptx). Notebooks produce a single .ipynb file.
Tier Availability
| Format | Free | Cloud | Enterprise |
|---|---|---|---|
| Scientific Report (PDF + MD) | Available | Available | Available |
| Pipeline Notebook (.ipynb) | Available | Available | Available |
| Slide Deck (PDF) | Available | Available | Available |
| Slide Deck (PowerPoint) | Not available | Available | Available |
Free tier allowance: 1 export per month in total, shared across all formats — not one per format. The counter increments on every successful export regardless of which format you chose, so a scientific report and a slide deck draw from the same single allowance. Cloud and Enterprise have no export limit.
A second export in the same month returns:
429 Export limit reached (1/month for free tier). Upgrade for unlimited exports.Tips
Start a conversation before exporting. The export uses your chat history to generate content. An empty session produces an empty report.
Edit the Markdown source. Scientific reports include a .md file alongside the PDF. Open it in any text editor to refine wording, reorder sections, or add context before sharing.